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Lyme Disease Care in Philadelphia
Fishtown Medicine•4 min read
4.96 (124)

Lyme Disease Care in Philadelphia

Ashvin Vijayakumar MD

Medically Reviewed

Ashvin Vijayakumar MD•Updated May 30, 2026
On This Page
  • Acute Lyme
  • Lyme testing and the interpretation pitfalls
  • Co-infections
  • Late and chronic Lyme
  • Post-treatment Lyme disease syndrome
  • How Lyme care works at Fishtown Medicine
  • What it costs
  • Common Questions
  • Should I get tested after every tick bite?
  • What about single-dose doxycycline prophylaxis after a tick bite?
  • Why does my Lyme test say "positive" years after I was treated?
  • Is chronic Lyme a real diagnosis?
  • Do you prescribe long-course antibiotics for chronic Lyme?
  • What about herbal protocols for Lyme?
  • Deep Questions
  • How does Fishtown Medicine evaluate persistent post-Lyme symptoms?
  • What is the relationship between Lyme and POTS, MCAS, or chronic fatigue?
  • How does Philadelphia's healthcare landscape affect Lyme care?
  • What does the long-arc plan look like for someone with persistent post-Lyme symptoms?
  • ✦Key Takeaways
  • Related Services and Reading

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TL;DR30-second take

Lyme disease is endemic across the Delaware Valley and Philadelphia. Acute Lyme is simple to recognize and treat with doxycycline when the erythema migrans rash is present or when there is clear early disseminated disease. Late and post-treatment Lyme is more complicated: serology has interpretation pitfalls, persistent symptoms after treatment occur in 5-20% of patients, and the differential includes other tick-borne infections (anaplasmosis, babesiosis, Powassan), and post-treatment Lyme disease syndrome. Fishtown Medicine evaluates Lyme thoughtfully and is honest about the limits of current testing and treatment.

Philadelphia and the Delaware Valley have been Lyme country for decades. The black-legged tick (Ixodes scapularis) that carries Lyme is established across most of the suburbs, throughout Bucks, Chester, Montgomery, and Delaware counties, into Camden and Burlington, and increasingly into the Wissahickon and other green spaces in the city itself.

This page is how Fishtown Medicine in Philadelphia approaches tick bites, acute Lyme, late Lyme, post-treatment syndromes, and the broader tick-borne picture.

Acute Lyme

The classic acute presentation is the erythema migrans (EM) rash: a spreading, often (but not always) bull's-eye rash at the site of a tick bite, appearing 3-30 days after the bite. The rash is typically larger than 5 cm, expands over days, and is usually painless and non-pruritic.

In the right epidemiologic context (Lyme-endemic area, recent tick exposure), the EM rash is diagnostic. Serology is not required. We treat empirically with doxycycline 100 mg twice daily for 10-14 days (longer for early disseminated disease). For pregnant patients, children under 8, or doxycycline allergy, amoxicillin or cefuroxime is used.

Other acute presentations include flu-like illness without rash, often with fever and arthralgias, in someone with recent tick exposure. Empirical treatment is appropriate when the picture fits even without EM rash.

For asymptomatic patients with a known tick bite that is identified as Ixodes scapularis and has been attached for over 36 hours, single-dose doxycycline 200 mg (200 mg in adults) within 72 hours of removal is prophylaxis with reasonable evidence.

Lyme testing and the interpretation pitfalls

Standard testing is two-tiered: an ELISA or immunoassay followed by a confirmatory Western blot if the first test is positive or equivocal.

Important interpretation points:

  • Early Lyme (first 4-6 weeks) often tests negative because antibodies have not yet developed. Treat the EM rash without testing.
  • Antibodies persist for years after successful treatment. A positive test years after a treated episode does not mean ongoing infection.
  • False positives occur, particularly with EBV, certain autoimmune conditions, and other infections.
  • The "alternative" Lyme tests (CD57, certain IgG band-only criteria, urine antigen tests) sold by some clinics have not been validated and frequently lead to overdiagnosis.

We use FDA-approved two-tiered testing and interpret results within the clinical picture.

Co-infections

Co-infection with other tick-borne pathogens occurs in a meaningful fraction of Philadelphia Lyme cases. The major ones:

  • Anaplasmosis (Anaplasma phagocytophilum). Fever, headache, leukopenia. Treated with doxycycline.
  • Babesiosis (Babesia microti). Hemolysis, fever, can be severe in immunocompromised patients. Treated with atovaquone plus azithromycin.
  • Powassan virus. Rare but serious. Supportive care.
  • Borrelia miyamotoi. Increasingly recognized. Treated similarly to Lyme.
  • Alpha-gal syndrome. Tick-induced red meat allergy. See Alpha-Gal playbook.

For patients with severe acute Lyme or persistent symptoms, screening for co-infection is appropriate.

Late and chronic Lyme

Late Lyme disease (months after untreated infection) can present with arthritis (particularly large joints), neurologic symptoms (facial palsy, radiculopathy, encephalitis), or cardiac (carditis with heart block). These are typically responsive to longer courses of doxycycline or, for severe cases, IV ceftriaxone.

"Chronic Lyme disease" is a more contested term, often used for patients with persistent multi-system symptoms attributed to ongoing Borrelia infection. The mainstream medical position is that persistent Borrelia infection after appropriate treatment is rare; the alternative-medicine position is that it is common and requires prolonged antibiotic therapy.

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The evidence on long-course antibiotics for persistent symptoms is mixed and the major guidelines do not recommend extended antibiotic therapy beyond 4-8 weeks because the trials have not shown durable benefit and the risks (line infections, C. diff, antibiotic resistance) are real.

We are honest about this: we treat acute and late Lyme with evidence-based regimens, we do not prescribe prolonged antibiotic courses for unvalidated indications, and we work hard to identify and treat alternative or contributing diagnoses in patients with persistent symptoms.

Post-treatment Lyme disease syndrome

A subset of patients (5-20% in studies) have persistent symptoms - fatigue, musculoskeletal pain, cognitive symptoms - after treatment for acute Lyme. The mechanisms are debated and probably multiple: immune dysregulation, autonomic dysfunction, central sensitization, co-infection, comorbid conditions.

We manage these patients with the same thoughtful approach we use for long COVID and other post-infectious syndromes: structured workup, treatment of treatable comorbidities (sleep, thyroid, iron, mood, autonomic), and supportive care. We do not prescribe prolonged IV antibiotics for unvalidated indications.

How Lyme care works at Fishtown Medicine

For acute tick bites and possible EM rash, we offer same-day evaluation and treatment. For evaluation of chronic symptoms attributed to Lyme, the first visit is 90 minutes; we build the history, decide on the workup, and have an honest conversation about what evidence-based treatment looks like.

We coordinate with infectious disease at Penn, Jefferson, Temple, Main Line Health, or other Philadelphia programs for complex or treatment-refractory cases.

What it costs

Membership at Fishtown Medicine covers all visits and ongoing management; see pricing for current rates. All visits and ongoing management are included. Antibiotics and labs are billed separately at the cheapest of insurance or cash. Doxycycline is inexpensive at most Philadelphia pharmacies.

✦

Key Takeaways

  1. Lyme is endemic across the Philadelphia region and the Delaware Valley.
  2. Acute Lyme with EM rash is diagnostic and responsive to doxycycline.
  3. Lyme testing has interpretation pitfalls; FDA-approved two-tiered testing is the standard.
  4. "Chronic Lyme" is contested; persistent post-treatment symptoms are real and managed with supportive care.
  5. Fishtown Medicine treats Lyme with honesty within the evidence base.

Related Services and Reading

  • Long COVID Care in Philadelphia

  • POTS Treatment in Philadelphia

  • MCAS Treatment in Philadelphia

  • Chronic Fatigue Treatment in Philadelphia

  • Alpha-Gal Syndrome Playbook

  • Direct Primary Care in Philadelphia

  • Brain Fog Treatment - the medical workup for cognitive cloudiness

  • Sleep Disorders - from insomnia to OSA, the systematic sleep workup


Medical Disclaimer: This resource is educational and does not constitute medical advice. Lyme evaluation and treatment depend on the clinical picture. Talk with Dr. Ash about your specific situation.
Ashvin Vijayakumar MD (Dr. Ash)

Fishtown Medicine | Services

2418 E York St, Philadelphia, PA 19125·(267) 360-7927·hello@fishtownmedicine.com·HSA/FSA Eligible

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Frequently Asked Questions

Common Questions

No. Most ticks do not transmit disease. Testing immediately after a bite is usually negative because antibodies have not developed. Symptom monitoring and removing the tick promptly are more important than immediate testing.
For asymptomatic adults with a clearly identified Ixodes tick that has been attached for over 36 hours in a Lyme-endemic area, single-dose doxycycline 200 mg within 72 hours of removal is supported by the evidence and is what we typically use.
Antibodies persist for years after successful Lyme treatment. A positive antibody test does not mean current infection. The history and current symptoms matter more than the test result.
Persistent symptoms after Lyme treatment are real. Whether they reflect ongoing Borrelia infection is contested. The mainstream evidence-based position is that ongoing infection after appropriate treatment is rare; persistent symptoms have other mechanisms. We are honest about this and work to treat what is treatable.
Generally not, because the trial evidence does not support durable benefit and the risks are real. We do prescribe extended courses (4-8 weeks) for late Lyme disease with appropriate indication. Beyond that, we focus on supportive care and treatment of comorbid conditions.
The evidence base for herbal protocols (Buhner protocol, etc.) is weaker than for standard antibiotics. We do not actively recommend or discourage them, and ask patients to be honest with us about what they are using so we can manage interactions and watch for adverse effects.

Deep-Dive Questions

The same way we evaluate long COVID and other post-infectious syndromes. Structured workup for treatable comorbidities (sleep, thyroid, iron, vitamin D, depression, POTS, MCAS), screening for co-infections, attention to autonomic and metabolic contributors. Treatment is supportive and targeted at what is treatable rather than presumptive ongoing infection.
Like other infections, Lyme can trigger autonomic and immune dysregulation that persists after treatment. We see patients with post-Lyme POTS, MCAS-like features, and chronic fatigue. We manage these conditions on their own merits.
Acute Lyme is well-served by Philadelphia primary care and urgent care. The challenge is the persistent post-treatment population, which falls between specialties and is often poorly served. A direct primary care practice with time to coordinate and manage symptomatically fills a real gap.
Identification and treatment of treatable comorbidities, supportive care, pacing where post-exertional malaise is present, periodic reassessment. Many patients improve over 1-2 years. Some have prolonged courses. The framework is patience and ongoing attention.

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